PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G064500.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 305aa    MW: 33688.8 Da    PI: 7.8495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G064500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000381992371255
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Prupe.3G064500.3.p 199 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 237
                         6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.331187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-7197246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-10197248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.83E-6197241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MMAGNPNWWS SMHPPSLFPS QYVQLGSSNS LPLNSLPEHN LEPPQSWSQL LLGGLSSQED  60
GFGTLSHFQP KGRLENWEED QILIPQYPRA PVVDFIKQES NSQNSINLCN NPHGDEEFQL  120
APSSRPVWSP VQIMPVSSPR SCVTSLSNNN ILDFTYNKAD NKRNQHAVHS SECNSTATGG  180
MCKKARVQPS PSQPPLKVRK EKLGDRITAL HQLVSPFGKT DTASVLLEAI GYIRFLQGQI  240
EALSSPYLGN ASKNMRNQQS VQGERNCVFP EDPGQVCFIG SITPSKASRE GFEYKKASNK  300
LFYS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008228481.10.0PREDICTED: transcription factor bHLH68-like isoform X2
SwissprotQ8S3D19e-50BH068_ARATH; Transcription factor bHLH68
TrEMBLM5X5Y20.0M5X5Y2_PRUPE; Uncharacterized protein
STRINGVIT_09s0002g04120.t011e-107(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.19e-51bHLH family protein